Modelling quantitative structure-activity relationships between animal behaviour and environmental signal molecules.
نویسندگان
چکیده
Quantitative structure-activity relationships (QSARs) between the physicochemical properties of environmental signal molecules and animal behaviour have been determined. Past work has shown that oyster and barnacle larval settlement and mud crab abdominal pumping (for larval dispersal) are stimulated by small peptide cues. In all the peptides examined that were active at ecologically relevant concentrations, arginine or lysine was found at the carboxy terminus, but the amino acids found at preceding positions were highly variable. We used the multivariate partial least squares algorithm to relate composite properties for the hydrophilicity, size and charge of each amino acid and the sequence position to oyster, barnacle and crab behaviour patterns. From the information in these QSAR models, the apparent variability in amino acid sequences eliciting behavioural responses was explained in each case, and more potent peptide analogues are hypothesized on the basis of untested amino acid sequences. Remarkably, these peptide signals are all structurally related to the carboxy-terminal sequence of mammalian C5a anaphylatoxin, a potent white blood cell chemoattractant. Even more striking is the fact that these different animal species should rely on apparently similar environmental signal molecules when residing within a common habitat (southeastern US estuaries). Through the physicochemical properties of amino acids, the current QSAR models clearly differentiate between the optimal sequences for eliciting oyster, barnacle and mud crab behaviour. Thus, QSARs provide a novel and powerful method not only for relating the physicochemical properties of molecules to animal behaviour but also for differentiating responses to chemicals by individuals of different species.
منابع مشابه
Quantitative Structure-Activity Relationship Studies of 4-Imidazolyl- 1,4-dihydropyridines as Calcium Channel Blockers
Objective(s): The structure- activity relationship of a series of 36 molecules, showing L-type calcium channel blocking was studied using a QSAR (quantitative structure–activity relationship) method. Materials and Methods: Structures were optimized by the semi-empirical AM1 quantum-chemical method which was also used to find structure-calcium channel blocking activity trends. Several types of ...
متن کاملComputational Techniques Application in Environmental Exposure Assessment
In this chapter, the application of computational techniques in environmental exposure assessment was described. The most important groups of these techniques are Multimedia Mass-balance (MM) modelling and Quantitative Structure-Activity/Structure-Property Relationships (QSAR/QSPR) modelling. Multimedia Mass-balance models have been widely utilized for studying Long-Range Transport Potential (L...
متن کاملGenetic Variability in Growth Hormone Gene and Association between Restriction Fragment Length Polymorphisms (RFLP) Patterns and Quantitative Variation of Live Weight, Carcass, Behaviour, Heterophil and Lymphocyte Traits in Japanese Quails
Growth hormone gene plays a critical role in regulating growth and metabolism which leads to potential correlations between the polymorphisms of this gene and economic trait. A 776 bp fragment within the intron 1 region of the growth hormone gene from 346 individuals of an F2 population of Japanese quail was amplified. The polymerase chain reaction (PCR) product was digested using MspI restrict...
متن کاملQuantitative Structure - Activity Relationships Study of Carbonic Anhydrase Inhibitors Using Logistic Regression Model
Binary Logistic Regression (BLR) has been developed as non-linear models to establish quantitative structure- activity relationships (QSAR) between structural descriptors and biochemical activity of carbonic anhydrase inhibitors. Using a training set consisted of 21 compounds with known ki values, the model was trained and tested to solve two-class problems as active or inactive on the basi...
متن کاملIntegrative modelling of animal movement: incorporating in situ habitat and behavioural information for a migratory marine predator.
A fundamental goal in animal ecology is to quantify how environmental (and other) factors influence individual movement, as this is key to understanding responsiveness of populations to future change. However, quantitative interpretation of individual-based telemetry data is hampered by the complexity of, and error within, these multi-dimensional data. Here, we present an integrative hierarchic...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- The Journal of experimental biology
دوره 201 Pt 2 شماره
صفحات -
تاریخ انتشار 1998